Translator for HPLC HINTS and TIPS for Chromatographers

Saturday, April 2, 2016

Chromophore, Chromophores, UV Absorbing for HPLC Analysis and Detection

A compound's absorption coefficient relates to its "strength". I find it useful to know which compounds can (and cannot) be easily detected by UV/VIS and a quick analysis of their chemical groups can provide an answer. Please note that the actual measured absorbance maximums will vary depending on the solution that the compound is dissolved in. Beta-Carotene is included as a very interesting structural example because it is composed of long chains of conjugated double bonds (isoprene units) which are cyclised at each end. Here are some other popular examples:

KEY CHROMOPHORE        Absorption MAX (nm)  STRENGTH

acetylide                                    177                           medium
aldehyde (2)                                210                           strong
anthracene                                 252 & 375                strong
azido                                          190                           medium
amine                                         195                           weak
benzene                                     184 & 255                strong
β-carotene                                  450                          medium
disulfide                                      194                          medium
ether                                           185                           weak
ethylene                                     190                           medium
ketone (2)                                   190                           weak
naphthalane                              220 & 286                strong
nitrate                                        270                           weak-strong
nitrite                                         225                           weak
nitro                                           210                           strong
oxime                                         190                           medium
thiol                                            195                           weak
thioketone                                  205                           strong
thioether                                     194                           medium
conjugated ring                        varies                          strong

Notes: 

  1. Chromophore conjugation is the process that gives rise to multiple spectral peaks (or shoulders) which are very useful in qualitative identification for HPLC (Spectral fingerprinting). For more information on this topic, I recommend a very well written description of UV/VIS spectroscopy fundamentals at this link.
  2. Other interesting examples: Carbonyl (aldehyde) as found in Acetaldehyde; 293nm. Carbonyl (ketone) such as found in Acetone; 271nm.

Data supplied from "Instrumental Methods of Analysis"; Willard, Merritt & Dean; D. Van Nostrand Co. Inc., (1965).

4 comments:

  1. Hi Sir,

    I am working on biogenic amines and will be using o-phthaldialdehye as the derivatization reagent. Will a UV-Vis detector be appropriate for this. Thank you.

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    Replies
    1. NO. OPA is used to create a fluorophore so a Fluorescence detector (FLD) should be used (excitation wavelength ~ 360 nm emission ~ 455 nm). *For best results, a DAD (UV/VIS) detector should be used inline with the FLD.

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  2. Most of our compounds are sugars and the methods we were provided use 205 nm for detection with methanol. Our testing lab in California has been unable to identify the sample compounds using our uplc system. Does this mean we should not use a uplc method or maybe a uplc method with a different detector?

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    Replies
    1. Many sugars can be detected at very low wavelength such as 205 nm (5 nm bw), BUT they will be detected only at higher concentration levels as most sugars have little to no chromophores. You also mentioned that your HPLC method uses METHANOL as the RP solvent. Methanol should not be used for this method as its typical low UV limit is around 230 nm rendering it useless for analysis below that range. A solvent such as ACN would be better as, depending on the purity used, should be good to ~ 195-200 nm. Note: Even with ACN in place of methanol, your detection limits will still be very poor, but if the concentration levels found in your samples are high enough, may be fine (run a series of stds to find the limit of detection using your method).

      Regarding your questions about "uplc", please note that "UPLC" is just a trade-name (brand), not a technique. No matter what type of high pressure liquid chromatography column, particle, instrument you use, the technique is always called or correctly known as "HPLC", not UPLC. *Correct terminology is so very important in science. The issues with your proposed (or your client's) method appear to have nothing to do with brand names. The use of methanol as a mobile phase solvent where an analysis of sugars at 205 nm calls into question the training of the person who developed it. No such method should be used without revision to include appropriate UV clear solvents first.

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